Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923944.1_cds_XP_016472413.1_64649
CDS Infomation

[gene=LOC107794443] [db_xref=GeneID:107794443] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016472413.1] [location=complement(join(7791..7942,8115..8186,8454..8526,9134..9224,9317..9390,9579..9741,10183..10407,11633..11880,11962..12091,13082..13326))] [gbkey=CDS]
Sequence

ATGGTGAAGATAATGGATCTGAGGAGAAATGGGTATTTGATACTTTTGTTGGTTTTGTTG
GGTGGTGATTATGAGGTAGGTGTGAAGGGGGAGAATAATGTGGTTTTCAATGTGAAGCAT
AAATTTGGCGGGCGTGGAAAGTCTGTTTTGAAGGATCTCAAAGACCACGATGCCCGTCGT
CACGGCAGAATGCTCGCCGCCGCCGACTTCCAGTTGGGTGGCAACGGCAGTCCCACCGGT
GCAGCGCTATATTTCACTAAGCTTTCAATTGGGACACCTTCAAAGGACTATCATGTCCAG
GTCGATACTGGAAGTGACCTTTTTTGGGTAAACTGTGCACGTTGTCTCAGATGTCCTACG
AAAAGCAAACTCGGGATAGATTTAGTGCAATACGACTTACAAGCTTCAACAACTGGGAAA
TCTATTACCTGCGAGCAAGATGTTTGCAGTGCTATGTTCAATGCAGACAGCTCTGAATGC
AAGGTGGGAAAGCCCTGTGAATATTTGGTTACTTATGGAGATGGCAGCTCAACTGGAGGA
TACTTTGTAAAAGATAACATCTATTTGGATCAAGTGTCGGGAGACTATAAAACATCATCC
TTACAGGGAACTGTAGCATTTGGGTGTTCGTCTCAACAATCTGGAGACCTAGGTACATCT
ACTAATGCGGTTGATGGGATAATTGGTTTTGGAGAAGCAAATTCGTCTGTCATCTCACAG
TTAGCTGCAGCTGGAACGGTGAAAAAAATGTTCGCACATTGCCTGGACGGAGTTAAAGGA
GGTGGTATATTTGCTATTGGACAAGTAGTTGAGCCAAAAGTAAATTCAGCACCATTAGTC
CCAAATCGGGCACATTATACTGTTTCTCTGAAGGATATTGAGGTTGGTAGAGAAGTTCTA
GACATCCCGACTTCCCTGTTTGAGTCGAAATCCAGTAAAAAAGCAATAATTGACAGCGGG
ACAACTTTAGTATATCTTCCGAGCAAGGCCTATAATGCTCTCATGAACAAGCTGATGTCA
AAACAACCACAATTGAAGACTCATCATCTTGACGGAGACTTTGACTGCTTTATCTACAGC
GGAAATGTTGACGATGGTTTCCCAGCTGTAACATTTCAGTTTGTGGGAAATCTTTCTTTG
ACAGCTTATCCCCATGATTATCTTTTCCAAGTTCGCGACAATGAATGGTGTATTGGTTGG
CAGGAGGGAACACAGGGAAAGGATGGAAATGAAATCTATCTGTTAGGAGATCTTCTGTTA
TCAAACAAGCTTGTTCTGTATGATCTTGAGAAACAGACCATTGGTTGGACTCAATATGAC
TGCTCGTCGAGCATTAAAGTGAAAGACGAAACTTCTGGAAATGTGTATACTGTGGGTGCT
CACAAGATTTCATCAGCGTCTAATTTGGATTCAAGAATGGCTTTTACATTCTTCTTGTCA
ATCATCTCTTTTCTCTGCTTTTTGTTGAACTGA

Peptide Sequence

PEP ID

XP_016472413.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MVKIMDLRRNGYLILLLVLLGGDYEVGVKGENNVVFNVKHKFGGRGKSVLKDLKDHDARR
HGRMLAAADFQLGGNGSPTGAALYFTKLSIGTPSKDYHVQVDTGSDLFWVNCARCLRCPT
KSKLGIDLVQYDLQASTTGKSITCEQDVCSAMFNADSSECKVGKPCEYLVTYGDGSSTGG
YFVKDNIYLDQVSGDYKTSSLQGTVAFGCSSQQSGDLGTSTNAVDGIIGFGEANSSVISQ
LAAAGTVKKMFAHCLDGVKGGGIFAIGQVVEPKVNSAPLVPNRAHYTVSLKDIEVGREVL
DIPTSLFESKSSKKAIIDSGTTLVYLPSKAYNALMNKLMSKQPQLKTHHLDGDFDCFIYS
GNVDDGFPAVTFQFVGNLSLTAYPHDYLFQVRDNEWCIGWQEGTQGKDGNEIYLLGDLLL
SNKLVLYDLEKQTIGWTQYDCSSSIKVKDETSGNVYTVGAHKISSASNLDSRMAFTFFLS
IISFLCFLLN

Transcript Sequence

Gene sequence data has not been registered.